STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2MIJ3_ORYLAUncharacterized protein. (781 aa)    
Predicted Functional Partners:
piwil2
Uncharacterized protein; Belongs to the argonaute family.
   
 0.726
piwil1
Uncharacterized protein; Belongs to the argonaute family.
   
 0.698
ENSORLP00000029810
Uncharacterized protein.
    
 
 0.559
efnb1
Ephrin-B1; Belongs to the ephrin family.
      
 0.558
H2MMA0_ORYLA
Tudor domain containing 9.
   
 0.539
ENSORLP00000040614
Tudor domain containing 12.
    
 0.491
Alpk1
Alpha-type protein kinase domain-containing protein.
   
    0.455
ENSORLP00000041553
Uncharacterized protein.
   
    0.455
helz2
RNB domain-containing protein.
   
 0.452
fkbp6
Peptidylprolyl isomerase.
   
 
 0.452
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.