Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC101167730 | LOC101173825 | ENSORLP00000028200 | ENSORLP00000018483 | Glyceraldehyde-3-phosphate dehydrogenase. | Peptidase M20 domain-containing protein 2; Belongs to the peptidase M20A family. | 0.518 |
LOC101167730 | gapdh | ENSORLP00000028200 | ENSORLP00000038395 | Glyceraldehyde-3-phosphate dehydrogenase. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.934 |
LOC101173825 | LOC101167730 | ENSORLP00000018483 | ENSORLP00000028200 | Peptidase M20 domain-containing protein 2; Belongs to the peptidase M20A family. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.518 |
LOC101173825 | gapdh | ENSORLP00000018483 | ENSORLP00000038395 | Peptidase M20 domain-containing protein 2; Belongs to the peptidase M20A family. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.518 |
LOC101173825 | mdn1 | ENSORLP00000018483 | ENSORLP00000022427 | Peptidase M20 domain-containing protein 2; Belongs to the peptidase M20A family. | Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. | 0.408 |
LOC101173825 | pgrmc2 | ENSORLP00000018483 | ENSORLP00000022479 | Peptidase M20 domain-containing protein 2; Belongs to the peptidase M20A family. | Progestin receptor membrane component 2; Belongs to the cytochrome b5 family. | 0.457 |
gapdh | LOC101167730 | ENSORLP00000038395 | ENSORLP00000028200 | Glyceraldehyde-3-phosphate dehydrogenase. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.934 |
gapdh | LOC101173825 | ENSORLP00000038395 | ENSORLP00000018483 | Glyceraldehyde-3-phosphate dehydrogenase. | Peptidase M20 domain-containing protein 2; Belongs to the peptidase M20A family. | 0.518 |
mdn1 | LOC101173825 | ENSORLP00000022427 | ENSORLP00000018483 | Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. | Peptidase M20 domain-containing protein 2; Belongs to the peptidase M20A family. | 0.408 |
pgrmc2 | LOC101173825 | ENSORLP00000022479 | ENSORLP00000018483 | Progestin receptor membrane component 2; Belongs to the cytochrome b5 family. | Peptidase M20 domain-containing protein 2; Belongs to the peptidase M20A family. | 0.457 |