STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c6Complement component 6. (934 aa)    
Predicted Functional Partners:
c9
Complement component 9.
   
0.981
c7
Complement component 7a.
  
0.976
c5
Uncharacterized protein.
   
 0.971
c8g
Complement component 8, gamma polypeptide; Belongs to the calycin superfamily. Lipocalin family.
   
 0.918
C8A
Complement C8 alpha chain.
   
 
0.876
c8b
Complement component 8, beta polypeptide.
   
 
0.765
LOC101157076
Vitronectin b.
   
 
 0.572
LOC101170202
Vitronectin a.
   
 
 0.572
LOC101174608
Complement component 7b.
  
 
 
0.570
LOC101162768
Zgc:56235.
     
  0.540
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.