STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cep89Uncharacterized protein. (632 aa)    
Predicted Functional Partners:
cep83
Centrosomal protein 83.
     
 0.845
cep164
WW domain-containing protein.
     
 0.791
fbf1
Uncharacterized protein.
     
 0.713
sclt1
Sodium channel and clathrin linker 1.
     
 0.676
CEP128
Centrosomal protein 128.
      
 0.636
cep76
Centrosomal protein 76.
     
 0.606
pigl
Phosphatidylinositol glycan anchor biosynthesis, class L.
   
    0.594
LOC101173310
Zgc:63587; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
     
 0.584
LOC101157973
Septin 2; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
     
 0.584
cep104
Centrosomal protein 104.
      
 0.569
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.