Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Birc6 | ENSORLP00000026261 | ENSORLP00000032816 | ENSORLP00000026261 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.981 |
Birc6 | H2M970_ORYLA | ENSORLP00000032816 | ENSORLP00000015051 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Ubiquitin-like domain-containing protein. | 0.992 |
Birc6 | H2MJM5_ORYLA | ENSORLP00000032816 | ENSORLP00000018874 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Transmembrane protein 189. | 0.583 |
Birc6 | LOC101155761 | ENSORLP00000032816 | ENSORLP00000012513 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.981 |
Birc6 | birc6 | ENSORLP00000032816 | ENSORLP00000002203 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Baculoviral IAP repeat containing 6. | 0.968 |
Birc6 | park7 | ENSORLP00000032816 | ENSORLP00000005364 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | DJ-1. | 0.436 |
Birc6 | uba52 | ENSORLP00000032816 | ENSORLP00000010731 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Ubiquitin A-52 residue ribosomal protein fusion product 1. | 0.992 |
Birc6 | ube2g2 | ENSORLP00000032816 | ENSORLP00000045287 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family. | 0.674 |
Birc6 | ube2v2 | ENSORLP00000032816 | ENSORLP00000026922 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Ubiquitin-conjugating enzyme E2 variant 2. | 0.981 |
ENSORLP00000026261 | Birc6 | ENSORLP00000026261 | ENSORLP00000032816 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.981 |
ENSORLP00000026261 | H2M970_ORYLA | ENSORLP00000026261 | ENSORLP00000015051 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Ubiquitin-like domain-containing protein. | 0.838 |
ENSORLP00000026261 | H2MJM5_ORYLA | ENSORLP00000026261 | ENSORLP00000018874 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Transmembrane protein 189. | 0.602 |
ENSORLP00000026261 | birc6 | ENSORLP00000026261 | ENSORLP00000002203 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Baculoviral IAP repeat containing 6. | 0.981 |
ENSORLP00000026261 | park7 | ENSORLP00000026261 | ENSORLP00000005364 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | DJ-1. | 0.588 |
ENSORLP00000026261 | uba52 | ENSORLP00000026261 | ENSORLP00000010731 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Ubiquitin A-52 residue ribosomal protein fusion product 1. | 0.838 |
ENSORLP00000026261 | ube2g2 | ENSORLP00000026261 | ENSORLP00000045287 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family. | 0.711 |
H2M970_ORYLA | Birc6 | ENSORLP00000015051 | ENSORLP00000032816 | Ubiquitin-like domain-containing protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.992 |
H2M970_ORYLA | ENSORLP00000026261 | ENSORLP00000015051 | ENSORLP00000026261 | Ubiquitin-like domain-containing protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.838 |
H2M970_ORYLA | H2MJM5_ORYLA | ENSORLP00000015051 | ENSORLP00000018874 | Ubiquitin-like domain-containing protein. | Transmembrane protein 189. | 0.712 |
H2M970_ORYLA | LOC101155761 | ENSORLP00000015051 | ENSORLP00000012513 | Ubiquitin-like domain-containing protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.829 |
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