STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2MJT0_ORYLAUncharacterized protein. (589 aa)    
Predicted Functional Partners:
Nf1
Uncharacterized protein.
 
     0.943
mad2l1
HORMA domain-containing protein.
   
 0.882
anapc4
Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family.
    
 0.851
spred1
Sprouty related EVH1 domain containing 1.
    
 0.834
SPRED2
Sprouty related EVH1 domain containing 2.
    
 0.822
LOC105358735
Sprouty related EVH1 domain containing 2a.
    
 0.822
cdc16
Cell division cycle 16 homolog (S. cerevisiae).
    
 0.810
anapc2
Anaphase promoting complex subunit 2; Belongs to the cullin family.
    
  0.807
anapc1
Anaphase promoting complex subunit 1.
    
 0.792
ENSORLP00000033350
Uncharacterized protein.
    
 0.792
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.