STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101163641Heme oxygenase 2a. (332 aa)    
Predicted Functional Partners:
blvra
Biliverdin reductase A.
     
 0.938
fech
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 0.938
ENSORLP00000034462
Uncharacterized protein; Belongs to the multicopper oxidase family.
    
 0.912
LOC101161443
Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.
     
 0.907
LOC101166486
NADPH--cytochrome P450 reductase; This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5; In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
    
 
 0.636
nfe2l2
Nuclear factor, erythroid 2-like 2a.
     
 0.455
fdx2
Ferredoxin 2.
    
 
 0.436
fdx1
2Fe-2S ferredoxin-type domain-containing protein.
    
 
 0.436
tmem254
Uncharacterized protein.
    
 0.429
sgtb
Small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta.
     
 0.415
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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