STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
castor2Cytosolic arginine sensor for mTORC1 subunit 2. (328 aa)    
Predicted Functional Partners:
CASTOR1
Cytosolic arginine sensor for mTORC1 subunit 1.
  
  
 
0.901
mettl25
Methyltransferase like 25.
    
 0.782
mios
Missing oocyte, meiosis regulator, homolog (Drosophila).
    
 0.751
wdr59
WD repeat domain 59.
    
 0.717
wdr24
WD repeat domain 24.
    
 0.689
parp16
Poly [ADP-ribose] polymerase.
    
 0.683
seh1l
SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.
     
 0.682
itfg2
Integrin alpha FG-GAP repeat containing 2.
     
 0.634
c23h12orf66
Si:ch211-125a15.1.
     
 0.631
Depdc5
Uncharacterized protein.
     
 0.593
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.