STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101162295Sphingosine-1-phosphate receptor 5a; Belongs to the G-protein coupled receptor 1 family. (375 aa)    
Predicted Functional Partners:
LOC101155107
Uncharacterized protein.
     
 0.521
NTN4
Netrin 4.
     
 0.521
sos2
Son of sevenless homolog 2 (Drosophila).
      
 0.516
LOC100125525
Uncharacterized protein.
    
 0.427
H2LLT1_ORYLA
Sphingosine-1-phosphate receptor 2; Belongs to the G-protein coupled receptor 1 family.
  
 
0.409
arid5b
AT-rich interaction domain 5B.
      
 0.407
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.