STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101157720Kruppel-like factor 5 like. (424 aa)    
Predicted Functional Partners:
LOC101155601
CCAAT enhancer binding protein beta.
    
 0.599
ENSORLP00000033347
CCAAT enhancer binding protein delta.
    
 0.594
LOC101160197
E1A binding protein p300 a.
    
 0.483
LOC101168870
E1A binding protein p300 b.
    
 0.483
B4galt2
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2.
      
 0.478
wwp1
WW domain containing E3 ubiquitin protein ligase 1.
    
 0.465
wwp2
E3 ubiquitin-protein ligase.
    
 0.465
Cebpa
CCAAT enhancer binding protein alpha.
    
 0.411
LOC101156536
CCAAT/enhancer binding protein (C/EBP) 1.
    
 0.411
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.