STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc38a9Solute carrier family 38 member 9. (551 aa)    
Predicted Functional Partners:
lamtor5
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.
    
 0.999
lamtor3
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3.
    
 0.999
lamtor1
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
    
 0.999
lamtor4
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 4.
    
 0.998
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
 0.995
LOC101162152
Ras-related GTP binding A.
   
 0.959
H2M111_ORYLA
Uncharacterized protein.
    
 0.916
rragc
Ras-related GTP binding Ca.
    
 0.916
LOC101158573
V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.
    
 0.861
flcn
Folliculin.
    
 
 0.806
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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