STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mettl6Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family. (308 aa)    
Predicted Functional Partners:
tsr3
Probable ribosome biogenesis protein tsr3; Probable pre-rRNA processing protein involved in ribosome biogenesis.
 
 
  
 0.827
mettl14
Methyltransferase like 14; Belongs to the MT-A70-like family.
   
  
 0.697
wtap
WT1 associated protein.
      
 0.675
thrap3
Thyroid hormone receptor associated protein 3b.
      
 0.630
LOC101167482
Thyroid hormone receptor associated protein 3a.
      
 0.617
thrb
Thyroid hormone receptor beta.
      
 0.579
rspry1
Ring finger and SPRY domain containing 1.
   
  
 0.576
eaf1
ELL associated factor 1.
      
 0.560
ell2
Elongation factor, RNA polymerase II, 2.
      
 0.559
RERG
RAS like estrogen regulated growth inhibitor.
      
 0.559
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.