STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arl2bpADP-ribosylation factor-like 2 binding protein. (173 aa)    
Predicted Functional Partners:
arl2
ADP-ribosylation factor-like 2; Belongs to the small GTPase superfamily. Arf family.
   
 0.978
rspry1
Ring finger and SPRY domain containing 1.
 
    
 0.669
pla2g1b
Phospholipase A(2).
      
 0.562
ttc8
Tetratricopeptide repeat domain 8.
   
  
 0.560
c16h8orf37
Uncharacterized protein.
      
 0.560
gpatch3
G patch domain containing 3.
      
 0.559
efcab1
EF-hand calcium binding domain 1.
      
 0.558
bsdc1
BSD domain containing 1.
      
 0.558
eaf1
ELL associated factor 1.
      
 0.558
LOC101171690
Zinc and ring finger 2b.
      
 0.558
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.