STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrps22Mitochondrial ribosomal protein S22. (342 aa)    
Predicted Functional Partners:
dap3
Death associated protein 3.
   
 0.997
mrps16
Mitochondrial ribosomal protein S16.
   
 0.997
mrps9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
 0.996
mrps35
Mitochondrial ribosomal protein S35.
   
 0.996
mrps26
Mitochondrial ribosomal protein S26.
   
 0.996
ptcd3
Pentatricopeptide repeat domain 3.
   
 0.995
mrps31
Mitochondrial ribosomal protein S31.
   
 0.994
mrps15
Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
   
 0.994
Mrps28
Mitochondrial ribosomal protein S28.
   
  0.994
mrps10
Mitochondrial ribosomal protein S10.
   
 0.993
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.