STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znf703Zinc finger protein 703. (587 aa)    
Predicted Functional Partners:
EBF1
EBF transcription factor 1.
      
 0.583
fign
Fidgetin; Belongs to the AAA ATPase family.
      
 0.558
LOC101162817
AAA domain-containing protein.
      
 0.527
BCL11B
Uncharacterized protein.
     
 0.513
ebf3
EBF transcription factor 3a.
      
 0.502
LOC101162765
EBF transcription factor 1.
      
 0.502
hif1an
Hypoxia inducible factor 1 subunit alpha inhibitor.
      
 0.434
pax5
Paired box 5.
      
 0.404
sgsm3
Small G protein signaling modulator 3.
      
 0.400
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.