STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mcatMalonyl CoA:ACP acyltransferase (mitochondrial). (368 aa)    
Predicted Functional Partners:
oxsm
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 0.998
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.989
palb2
PALB2_WD40 domain-containing protein.
  
 0.988
acacb
Acetyl-CoA carboxylase beta.
  
 
 0.955
LOC101155873
Acetyl-CoA carboxylase alpha.
  
 
 0.955
acot13
Acyl-CoA thioesterase 13.
  
  
 0.950
ACSF3
Acyl-CoA synthetase family member 3.
  
 
 0.936
mrps16
Mitochondrial ribosomal protein S16.
  
 
 0.932
Mrps6
Mitochondrial ribosomal protein S6.
  
 
 0.911
aasdhppt
Aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase.
  
  
 0.873
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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