STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tnfrsf21Tumor necrosis factor receptor superfamily, member 21. (651 aa)    
Predicted Functional Partners:
LOC101172288
Amyloid beta (A4) precursor protein b.
    
 
 0.864
APP
Amyloid beta precursor protein.
    
 
 0.864
aplp2
Amyloid beta (A4) precursor-like protein 2.
    
 
 0.700
tradd
Tnfrsf1a-associated via death domain.
    
 
 0.682
pla2g4a
Phospholipase A2.
      
 0.588
aplp1
Amyloid beta (A4) precursor-like protein 1.
    
 
 0.582
klf4
Kruppel-like factor 4.
      
 0.581
il17rel
IL17_R_N domain-containing protein.
      
 0.563
CASP6
Caspase 6; Belongs to the peptidase C14A family.
      
 0.558
LOC101155324
Beta-1,3-N-acetylglucosaminyltransferase.
      
 0.552
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.