STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ikbkeInhibitor of nuclear factor kappa B kinase subunit epsilon. (718 aa)    
Predicted Functional Partners:
sting1
Transmembrane protein 173.
   
 0.995
tank
TRAF family member-associated NFKB activator.
   
 0.995
LOC101158892
Interferon regulatory factor 3.
   
 0.989
cyld
Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.
   
 0.958
LOC101163809
Cylindromatosis (turban tumor syndrome), b.
   
 0.958
LOC101168449
Cylindromatosis (turban tumor syndrome), like; Belongs to the peptidase C19 family.
   
 0.958
LOC101167576
Uncharacterized protein.
   
 0.957
LOC101154761
Signal transducer and activator of transcription.
   
 0.952
sike1
Suppressor of IKBKE 1.
     
 0.946
ikbkg
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
   
 0.945
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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