STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101160478Solute carrier family 25 member 18; Belongs to the mitochondrial carrier (TC 2.A.29) family. (328 aa)    
Predicted Functional Partners:
LOC101157878
Glycerophosphodiester phosphodiesterase domain containing 5a.
   
  
 0.814
nkx6-2
NK6 homeobox 2.
   
  
 0.571
LOC101170230
Inhibin subunit beta Aa.
      
 0.570
gabbr1
Gamma-aminobutyric acid (GABA) B receptor, 1b.
   
  
 0.515
olig2
Oligodendrocyte lineage transcription factor 2.
   
  
 0.510
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.