STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znf148Zinc finger protein 148. (803 aa)    
Predicted Functional Partners:
akirin2
Akirin 2.
      
 0.730
LOC101168162
Uncharacterized protein.
      
 0.730
LOC101163549
Uncharacterized protein.
    
 0.694
hlx
H2.0-like homeo box 1 (Drosophila).
   
 0.688
LOC101158138
Ring finger and CCCH-type domains 1b.
    
 
 0.665
arhgef2
Rho/rac guanine nucleotide exchange factor (GEF) 2.
      
 0.658
dhx58
DEXH (Asp-Glu-X-His) box polypeptide 58.
    
 
 0.616
LOC101167902
Tyrosine-protein kinase.
    
 0.612
pde4b
Phosphodiesterase.
    
 0.600
PRKCA
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
   
 
 0.577
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.