STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101169389Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase a. (441 aa)    
Predicted Functional Partners:
man2a2
Alpha-mannosidase.
     
 0.936
LOC101174073
Alpha-mannosidase.
     
 0.936
man1a2
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
    
 0.927
man1c1
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
    
 0.927
LOC101158740
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
    
 0.927
LOC101173236
Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase b.
  
  
 
0.901
eprs1
Glutamyl-prolyl-tRNA synthetase.
      
 0.690
yars1
Tyrosine--tRNA ligase.
      
 0.559
mgat2
Mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase.
      
 0.558
alg3
Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase; Adds the first Dol-P-Man derived mannose in an alpha-1,3 linkage to Man(5)GlcNAc(2)-PP-Dol.
      
 0.475
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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