STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
btbd7BTB (POZ) domain containing 7. (1128 aa)    
Predicted Functional Partners:
CCDC88A
Coiled-coil domain containing 88A.
      
 0.690
allc
Allantoicase.
      
 0.690
Unc79
Uncharacterized protein.
      
 0.690
timp4
TIMP metallopeptidase inhibitor 4, tandem duplicate 2.
      
 0.689
kiaa1324
Si:ch211-163l21.8.
      
 0.678
kctd2
Potassium channel tetramerization domain containing 2.
      
 0.560
kbtbd8
Kelch repeat and BTB (POZ) domain containing 8.
      
 0.559
dym
Dymeclin.
      
 0.558
ankfy1
Ankyrin repeat and FYVE domain containing 1.
      
 0.558
akap6
A kinase (PRKA) anchor protein 6.
      
 0.442
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.