STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
magi2Membrane associated guanylate kinase, WW and PDZ domain containing 2a. (1331 aa)    
Predicted Functional Partners:
Magi2
PDZ domain-containing protein.
 
      0.894
nkpd1
NTPase, KAP family P-loop domain containing 1.
    
   0.549
LOC101155812
ANK_REP_REGION domain-containing protein.
    
   0.549
LOC101173112
Kinase D-interacting substrate 220b.
    
   0.549
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 
 0.450
LOC101175652
GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein.
    
 
 0.420
zfat
Uncharacterized protein.
      
 0.400
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.