Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ddx18 | ebna1bp2 | ENSORLP00000010155 | ENSORLP00000013303 | RNA helicase. | EBNA1 binding protein 2. | 0.984 |
ddx18 | gnl2 | ENSORLP00000010155 | ENSORLP00000018355 | RNA helicase. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.989 |
ddx18 | gnl3 | ENSORLP00000010155 | ENSORLP00000020068 | RNA helicase. | Guanine nucleotide binding protein-like 3 (nucleolar). | 0.981 |
ddx18 | gtpbp4 | ENSORLP00000010155 | ENSORLP00000007747 | RNA helicase. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.997 |
ddx18 | mrto4 | ENSORLP00000010155 | ENSORLP00000043891 | RNA helicase. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.991 |
ddx18 | noc2l | ENSORLP00000010155 | ENSORLP00000007000 | RNA helicase. | NOC2-like nucleolar associated transcriptional repressor. | 0.993 |
ddx18 | pes1 | ENSORLP00000010155 | ENSORLP00000031409 | RNA helicase. | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.997 |
ddx18 | rpf2 | ENSORLP00000010155 | ENSORLP00000019023 | RNA helicase. | Ribosome production factor 2 homolog. | 0.993 |
ddx18 | rsl1d1 | ENSORLP00000010155 | ENSORLP00000003593 | RNA helicase. | Ribosomal L1 domain containing 1. | 0.999 |
ddx18 | wdr12 | ENSORLP00000010155 | ENSORLP00000045487 | RNA helicase. | Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.994 |
ebna1bp2 | ddx18 | ENSORLP00000013303 | ENSORLP00000010155 | EBNA1 binding protein 2. | RNA helicase. | 0.984 |
ebna1bp2 | gnl2 | ENSORLP00000013303 | ENSORLP00000018355 | EBNA1 binding protein 2. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.981 |
ebna1bp2 | gnl3 | ENSORLP00000013303 | ENSORLP00000020068 | EBNA1 binding protein 2. | Guanine nucleotide binding protein-like 3 (nucleolar). | 0.988 |
ebna1bp2 | gtpbp4 | ENSORLP00000013303 | ENSORLP00000007747 | EBNA1 binding protein 2. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.990 |
ebna1bp2 | mrto4 | ENSORLP00000013303 | ENSORLP00000043891 | EBNA1 binding protein 2. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.996 |
ebna1bp2 | noc2l | ENSORLP00000013303 | ENSORLP00000007000 | EBNA1 binding protein 2. | NOC2-like nucleolar associated transcriptional repressor. | 0.996 |
ebna1bp2 | pes1 | ENSORLP00000013303 | ENSORLP00000031409 | EBNA1 binding protein 2. | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.999 |
ebna1bp2 | rpf2 | ENSORLP00000013303 | ENSORLP00000019023 | EBNA1 binding protein 2. | Ribosome production factor 2 homolog. | 0.995 |
ebna1bp2 | rsl1d1 | ENSORLP00000013303 | ENSORLP00000003593 | EBNA1 binding protein 2. | Ribosomal L1 domain containing 1. | 0.994 |
ebna1bp2 | wdr12 | ENSORLP00000013303 | ENSORLP00000045487 | EBNA1 binding protein 2. | Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.997 |
page 1 of 6