STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
selenotSelenoprotein T; Belongs to the SelWTH family. Selenoprotein T subfamily. (177 aa)    
Predicted Functional Partners:
selenok
Selenoprotein K.
      
 0.669
selenof
Selenoprotein F.
   
  
 0.668
selenoo
Selenoprotein O1.
      
 0.663
txn
Thioredoxin; Belongs to the thioredoxin family.
    
 
 0.655
LOC101173635
Selenoprotein M.
      
 0.632
eefsec
Eukaryotic elongation factor, selenocysteine-tRNA-specific.
   
  
 0.561
selenon
Selenoprotein N.
      
 0.560
txnrd2
Thioredoxin reductase 2, tandem duplicate 1.
      
 0.560
selenoi
Selenoprotein I; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
      
 0.559
ENSORLP00000039854
Uncharacterized protein.
      
 0.559
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.