STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnase2Deoxyribonuclease II, lysosomal. (368 aa)    
Predicted Functional Partners:
LOC101173852
Uncharacterized protein.
  
  
 
0.909
LOC101174093
Deoxyribonuclease II beta.
  
  
 
0.906
bloc1s1
Biogenesis of lysosomal organelles complex-1, subunit 1.
   
 
  0.589
gns
N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family.
   
 0.530
LOC101164824
Glucosamine (N-acetyl)-6-sulfatase (Sanfilippo disease IIID), b.
   
 0.530
LOC105354787
Vesicle-associated membrane protein 8 (endobrevin).
     
 0.501
ap1g1
AP-1 complex subunit gamma.
     
 0.488
LOC101167321
AP-1 complex subunit gamma.
     
 0.488
LOC101171361
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
   
 
 0.441
ctsz
Cathepsin Z; Belongs to the peptidase C1 family.
   
 
 0.441
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.