STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c1qtnf7C1q and TNF related 7. (292 aa)    
Predicted Functional Partners:
ENSORLP00000028880
Uncharacterized protein.
  
 
  0.558
ENSORLP00000036829
Uncharacterized protein.
  
     0.531
ENSORLP00000030516
annotation not available
  
     0.528
ENSORLP00000027031
Uncharacterized protein.
  
     0.522
ENSORLP00000041124
Uncharacterized protein.
  
 
  0.461
ENSORLP00000031985
Uncharacterized protein.
  
     0.460
ENSORLP00000033929
Uncharacterized protein.
  
     0.447
Tep1
Uncharacterized protein.
    
 0.412
ENSORLP00000040907
TROVE domain-containing protein.
    
 0.410
ENSORLP00000041818
Uncharacterized protein.
    
 0.405
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.