STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trirTelomerase RNA component interacting RNase. (165 aa)    
Predicted Functional Partners:
H2M1Z4_ORYLA
Cytochrome c oxidase subunit 7C.
   
 0.965
LOC101165157
Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.
   
 0.949
LOC101165655
Ubiquinol-cytochrome c reductase, complex III subunit X.
   
 0.938
LOC101170993
Uncharacterized protein.
   
 0.926
LOC101170179
Uncharacterized protein.
   
 0.926
LOC101166394
Ubiquinol-cytochrome c reductase, complex III subunit VII.
   
 0.925
LOC101174857
Cytochrome c oxidase subunit 5B2.
   
 0.918
COX5B
Cytochrome c oxidase subunit 5B.
   
 0.918
LOC101154763
Cytochrome c oxidase subunit 6C.
   
 0.915
COX2
Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1.
   
 0.908
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.