STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Itih6Inter-alpha-trypsin inhibitor heavy chain family member 6. (807 aa)    
Predicted Functional Partners:
itih3
Inter-alpha-trypsin inhibitor heavy chain 1.
 
 
0.694
itih2
Inter-alpha-trypsin inhibitor heavy chain 2.
 
 
0.692
itih5
Inter-alpha-trypsin inhibitor heavy chain 5.
 
 
0.684
LOC101157076
Vitronectin b.
   
 0.594
LOC101170202
Vitronectin a.
   
 0.594
mib2
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.567
LOC101174944
C-type lectin domain family 3, member Ba.
   
 0.512
CLEC3B
C-type lectin domain family 3, member Bb.
   
 0.512
CDC37
Cell division cycle 37 homolog (S. cerevisiae).
    
 0.500
cdc37l1
Cell division cycle 37-like 1.
    
 0.500
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.