Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
POLR2E | gtf2h5 | ENSORLP00000019213 | ENSORLP00000026586 | RNA polymerase II subunit E. | General transcription factor IIH, polypeptide 5. | 0.896 |
POLR2E | polr1a | ENSORLP00000019213 | ENSORLP00000010996 | RNA polymerase II subunit E. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
POLR2E | polr1b | ENSORLP00000019213 | ENSORLP00000001089 | RNA polymerase II subunit E. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
POLR2E | polr1c | ENSORLP00000019213 | ENSORLP00000040290 | RNA polymerase II subunit E. | RNA polymerase I and III subunit C. | 0.999 |
POLR2E | polr1e | ENSORLP00000019213 | ENSORLP00000006483 | RNA polymerase II subunit E. | RNA polymerase I subunit E. | 0.999 |
POLR2E | taf1b | ENSORLP00000019213 | ENSORLP00000022672 | RNA polymerase II subunit E. | TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B. | 0.543 |
POLR2E | ttf1 | ENSORLP00000019213 | ENSORLP00000020408 | RNA polymerase II subunit E. | Si:ch73-376l24.4. | 0.638 |
POLR2E | twistnb | ENSORLP00000019213 | ENSORLP00000005003 | RNA polymerase II subunit E. | TWIST neighbor. | 0.999 |
POLR2E | znrd1 | ENSORLP00000019213 | ENSORLP00000027189 | RNA polymerase II subunit E. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.999 |
cavin1 | polr1a | ENSORLP00000042915 | ENSORLP00000010996 | Caveolae associated protein 1a. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.552 |
cavin1 | ttf1 | ENSORLP00000042915 | ENSORLP00000020408 | Caveolae associated protein 1a. | Si:ch73-376l24.4. | 0.637 |
gtf2h5 | POLR2E | ENSORLP00000026586 | ENSORLP00000019213 | General transcription factor IIH, polypeptide 5. | RNA polymerase II subunit E. | 0.896 |
gtf2h5 | polr1a | ENSORLP00000026586 | ENSORLP00000010996 | General transcription factor IIH, polypeptide 5. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.700 |
gtf2h5 | polr1b | ENSORLP00000026586 | ENSORLP00000001089 | General transcription factor IIH, polypeptide 5. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.702 |
gtf2h5 | polr1c | ENSORLP00000026586 | ENSORLP00000040290 | General transcription factor IIH, polypeptide 5. | RNA polymerase I and III subunit C. | 0.675 |
gtf2h5 | polr1e | ENSORLP00000026586 | ENSORLP00000006483 | General transcription factor IIH, polypeptide 5. | RNA polymerase I subunit E. | 0.764 |
gtf2h5 | taf1b | ENSORLP00000026586 | ENSORLP00000022672 | General transcription factor IIH, polypeptide 5. | TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B. | 0.572 |
gtf2h5 | ttf1 | ENSORLP00000026586 | ENSORLP00000020408 | General transcription factor IIH, polypeptide 5. | Si:ch73-376l24.4. | 0.626 |
gtf2h5 | twistnb | ENSORLP00000026586 | ENSORLP00000005003 | General transcription factor IIH, polypeptide 5. | TWIST neighbor. | 0.645 |
gtf2h5 | znrd1 | ENSORLP00000026586 | ENSORLP00000027189 | General transcription factor IIH, polypeptide 5. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.623 |
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