STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATG2BAutophagy related 2B. (2076 aa)    
Predicted Functional Partners:
ulk1
Unc-51 like autophagy activating kinase 1.
   
 0.977
LOC101167046
Unc-51 like autophagy activating kinase 1a.
   
 0.977
LOC101160680
Unc-51 like autophagy activating kinase 2.
   
 0.977
WIPI1
Uncharacterized protein.
    
 0.970
wipi2
WD repeat domain, phosphoinositide interacting 2.
    
 0.970
LOC101159269
WD repeat domain, phosphoinositide interacting 1.
    
 0.970
atg2a
Autophagy related 2A.
  
  
0.909
LOC101172961
Serine/threonine kinase 35; Belongs to the protein kinase superfamily.
   
 
 0.662
ulk3
Unc-51 like kinase 3; Belongs to the protein kinase superfamily.
   
 
 0.662
pdik1l
PDLIM1 interacting kinase 1 like; Belongs to the protein kinase superfamily.
   
 
 0.662
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.