STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2MP59_ORYLATroponin T2c, cardiac. (247 aa)    
Predicted Functional Partners:
LOC101156569
Troponin I type 1b (skeletal, slow).
 
 0.870
LOC101171577
Si:rp71-17i16.4.
   
 0.869
LOC101171829
Troponin C type 2 (fast).
   
 0.869
H2LWG8_ORYLA
Troponin I type 1a (skeletal, slow).
 
 0.866
LOC101155425
Troponin I type 2a (skeletal, fast), tandem duplicate 1.
 
 0.846
LOC101155923
Uncharacterized protein.
  
 0.839
LOC101171215
Troponin C type 1b (slow).
   
 0.825
LOC101174831
Troponin C type 1a (slow).
   
 0.825
LOC101167333
Uncharacterized protein.
 
 0.821
LOC101161235
Troponin I4b, tandem duplicate 2.
 
 0.820
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.