STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
th2BH4_AAA_HYDROXYL_2 domain-containing protein. (470 aa)    
Predicted Functional Partners:
Pcbd1
Pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha.
  
 0.975
PCBD2
Pterin-4 alpha-carbinolamine dehydratase 2.
  
 0.975
ddc
Uncharacterized protein.
   
 0.947
got2
Aspartate aminotransferase.
  
 
 0.940
spr
Sepiapterin reductase b.
   
 
 0.938
GOT1
Aspartate aminotransferase.
  
 
 0.937
got1
Aspartate aminotransferase.
  
 
 0.937
qdpr
Quinoid dihydropteridine reductase a.
    
 0.934
TYR
Tyrosinase.
     
 0.931
tat
Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate.
   
 
 0.926
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.