Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSORLP00000043840 | H2M6Q1_ORYLA | ENSORLP00000043840 | ENSORLP00000014148 | Metalloendopeptidase. | NTR domain-containing protein. | 0.590 |
ENSORLP00000043840 | LOC100144362 | ENSORLP00000043840 | ENSORLP00000044975 | Metalloendopeptidase. | Serotransferrin; Transferrins are iron binding transport proteins which can bind two Fe(3+) ions in association with the binding of an anion, usually bicarbonate. | 0.581 |
ENSORLP00000043840 | bf/c2 | ENSORLP00000043840 | ENSORLP00000007296 | Metalloendopeptidase. | Bf/C2 protein; Belongs to the peptidase S1 family. | 0.512 |
H2M6Q1_ORYLA | ENSORLP00000043840 | ENSORLP00000014148 | ENSORLP00000043840 | NTR domain-containing protein. | Metalloendopeptidase. | 0.590 |
H2M6Q1_ORYLA | LOC100144362 | ENSORLP00000014148 | ENSORLP00000044975 | NTR domain-containing protein. | Serotransferrin; Transferrins are iron binding transport proteins which can bind two Fe(3+) ions in association with the binding of an anion, usually bicarbonate. | 0.588 |
H2M6Q1_ORYLA | LOC105355982 | ENSORLP00000014148 | ENSORLP00000032703 | NTR domain-containing protein. | Metalloendopeptidase. | 0.590 |
H2M6Q1_ORYLA | LOC105357310 | ENSORLP00000014148 | ENSORLP00000040296 | NTR domain-containing protein. | Metalloendopeptidase. | 0.590 |
H2M6Q1_ORYLA | bf/c2 | ENSORLP00000014148 | ENSORLP00000007296 | NTR domain-containing protein. | Bf/C2 protein; Belongs to the peptidase S1 family. | 0.740 |
LOC100144362 | ENSORLP00000043840 | ENSORLP00000044975 | ENSORLP00000043840 | Serotransferrin; Transferrins are iron binding transport proteins which can bind two Fe(3+) ions in association with the binding of an anion, usually bicarbonate. | Metalloendopeptidase. | 0.581 |
LOC100144362 | H2M6Q1_ORYLA | ENSORLP00000044975 | ENSORLP00000014148 | Serotransferrin; Transferrins are iron binding transport proteins which can bind two Fe(3+) ions in association with the binding of an anion, usually bicarbonate. | NTR domain-containing protein. | 0.588 |
LOC100144362 | LOC101163028 | ENSORLP00000044975 | ENSORLP00000042573 | Serotransferrin; Transferrins are iron binding transport proteins which can bind two Fe(3+) ions in association with the binding of an anion, usually bicarbonate. | Apolipoprotein A-II. | 0.534 |
LOC100144362 | LOC101172614 | ENSORLP00000044975 | ENSORLP00000037915 | Serotransferrin; Transferrins are iron binding transport proteins which can bind two Fe(3+) ions in association with the binding of an anion, usually bicarbonate. | Transferrin receptor 1b. | 0.966 |
LOC100144362 | LOC105355982 | ENSORLP00000044975 | ENSORLP00000032703 | Serotransferrin; Transferrins are iron binding transport proteins which can bind two Fe(3+) ions in association with the binding of an anion, usually bicarbonate. | Metalloendopeptidase. | 0.581 |
LOC100144362 | LOC105357310 | ENSORLP00000044975 | ENSORLP00000040296 | Serotransferrin; Transferrins are iron binding transport proteins which can bind two Fe(3+) ions in association with the binding of an anion, usually bicarbonate. | Metalloendopeptidase. | 0.581 |
LOC100144362 | bf/c2 | ENSORLP00000044975 | ENSORLP00000007296 | Serotransferrin; Transferrins are iron binding transport proteins which can bind two Fe(3+) ions in association with the binding of an anion, usually bicarbonate. | Bf/C2 protein; Belongs to the peptidase S1 family. | 0.524 |
LOC100144362 | epo | ENSORLP00000044975 | ENSORLP00000030442 | Serotransferrin; Transferrins are iron binding transport proteins which can bind two Fe(3+) ions in association with the binding of an anion, usually bicarbonate. | Erythropoietin; Erythropoietin is the principal hormone involved in the regulation of erythrocyte differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Belongs to the EPO/TPO family. | 0.633 |
LOC100144362 | srprb | ENSORLP00000044975 | ENSORLP00000008073 | Serotransferrin; Transferrins are iron binding transport proteins which can bind two Fe(3+) ions in association with the binding of an anion, usually bicarbonate. | SRP receptor subunit beta. | 0.540 |
LOC100144362 | tfrc | ENSORLP00000044975 | ENSORLP00000012171 | Serotransferrin; Transferrins are iron binding transport proteins which can bind two Fe(3+) ions in association with the binding of an anion, usually bicarbonate. | Transferrin receptor 1a. | 0.968 |
LOC101163028 | LOC100144362 | ENSORLP00000042573 | ENSORLP00000044975 | Apolipoprotein A-II. | Serotransferrin; Transferrins are iron binding transport proteins which can bind two Fe(3+) ions in association with the binding of an anion, usually bicarbonate. | 0.534 |
LOC101172614 | LOC100144362 | ENSORLP00000037915 | ENSORLP00000044975 | Transferrin receptor 1b. | Serotransferrin; Transferrins are iron binding transport proteins which can bind two Fe(3+) ions in association with the binding of an anion, usually bicarbonate. | 0.966 |
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