STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100144362Serotransferrin; Transferrins are iron binding transport proteins which can bind two Fe(3+) ions in association with the binding of an anion, usually bicarbonate. (690 aa)    
Predicted Functional Partners:
tfrc
Transferrin receptor 1a.
  
 0.968
LOC101172614
Transferrin receptor 1b.
  
 0.966
epo
Erythropoietin; Erythropoietin is the principal hormone involved in the regulation of erythrocyte differentiation and the maintenance of a physiological level of circulating erythrocyte mass. Belongs to the EPO/TPO family.
  
 0.633
H2M6Q1_ORYLA
NTR domain-containing protein.
   
 
 0.588
LOC105355982
Metalloendopeptidase.
      
 0.581
LOC105357310
Metalloendopeptidase.
      
 0.581
ENSORLP00000043840
Metalloendopeptidase.
      
 0.581
srprb
SRP receptor subunit beta.
 
      0.540
LOC101163028
Apolipoprotein A-II.
   
  
 0.534
bf/c2
Bf/C2 protein; Belongs to the peptidase S1 family.
   
 0.524
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (24%) [HD]