STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ica1Islet cell autoantigen 1. (352 aa)    
Predicted Functional Partners:
pick1
Protein interacting with prkca 1.
    
 
 0.627
rab2a
RAB2A, member RAS oncogene family.
    
 
 0.578
pla2g6
Phospholipase A2, group VI (cytosolic, calcium-independent).
 
      0.520
dnajc27
DnaJ (Hsp40) homolog, subfamily C, member 27.
    
 
 0.455
rundc1
RUN domain containing 1.
    
 
 0.400
ccdc186
Si:ch211-225b10.4.
      
 0.400
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.