STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105354150V-set and transmembrane domain containing 2 like. (207 aa)    
Predicted Functional Partners:
GNAS
Uncharacterized protein.
      
 0.502
LOC101166373
GNAS complex locus.
      
 0.502
H2LJC9_ORYLA
Proprotein convertase subtilisin/kexin type 5a.
   
  
 0.499
pdyn
Prodynorphin.
   
  
 0.466
pdia4
Protein disulfide-isomerase A4; Belongs to the protein disulfide isomerase family.
      
 0.400
IGFBP3
Insulin like growth factor binding protein 3.
      
 0.400
ENSORLP00000039342
VGF nerve growth factor inducible.
   
  
 0.400
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.