STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101169535Phosphatidylinositol-5-phosphate 4-kinase, type II, gamma a. (416 aa)    
Predicted Functional Partners:
LOC101163663
Phosphatidylinositol-4-phosphate 5-kinase, type I, beta b.
     
0.935
LOC101169066
Phosphatidylinositol-4-phosphate 5-kinase, type I, gamma b.
     
0.935
LOC101173168
Phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b.
     
0.935
pip5k1c
Phosphatidylinositol-4-phosphate 5-kinase, type I, gamma a.
     
0.935
LOC101166403
Phosphatidylinositol-4-phosphate 5-kinase, type I, beta a.
     
0.935
LOC105355004
Phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, a.
     
0.935
pikfyve
Phosphoinositide kinase, FYVE finger containing.
     
 0.920
pip4p2
Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).
     
 0.919
LOC101159467
Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).
     
 0.917
synj1
Synaptojanin 1.
    
 0.917
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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