STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101170845Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. (110 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
     
 0.612
LOC101166157
Peroxiredoxin 4.
  
  
 0.482
LOC101173412
Thioredoxin domain-containing protein.
  
  
 0.429
dennd10
DENN domain containing 10.
  
  
 0.429
prdx3
Peroxiredoxin 3.
  
  
 0.429
prdx2
Peroxiredoxin 2.
  
  
 0.429
LOC101174176
Peroxiredoxin 6.
  
  
 0.429
LOC101175597
Peroxiredoxin 1.
  
  
 0.429
ENSORLP00000039626
Frataxin.
    
 
 0.405
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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