STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101155246WD repeat domain 26b. (610 aa)    
Predicted Functional Partners:
rmnd5b
Required for meiotic nuclear division 5 homolog B.
  
 0.967
trip12
Thyroid hormone receptor interactor 12.
   
  
 0.946
ranbp10
Ran binding protein 10.
   
 
 0.890
ranbp9
Uncharacterized protein.
   
 
 0.890
GID8
Uncharacterized protein.
    
 
 0.832
gsc
Goosecoid.
    
   0.832
LOC101165057
GID complex subunit 8 homolog b (S. cerevisiae).
    
 
 0.832
maea
Macrophage erythroblast attacher.
    
 0.807
SPRYD3
SPRY domain containing 3.
   
 
 0.761
LOC101156411
SPRY domain containing 3.
   
 
 0.761
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.