STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC1011642256-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2b. (531 aa)    
Predicted Functional Partners:
cstf3
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
     
 0.596
Psat1
Phosphoserine aminotransferase 1.
    
 0.595
cpb2
Carboxypeptidase B2 (plasma).
     
 0.575
LOC101174663
TP53 induced glycolysis regulatory phosphatase a.
    
 0.541
LOC101175449
TP53 induced glycolysis regulatory phosphatase b.
    
 0.522
hnf1a
HNF1 homeobox a.
      
 0.505
ENSORLP00000029445
Somatostatin receptor 1b; Belongs to the G-protein coupled receptor 1 family.
     
 0.496
LOC101173933
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.493
pgk1
Phosphoglycerate kinase.
  
 
 0.493
gpi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.493
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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