STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2MR15_ORYLACytochrome P450, family 1, subfamily C, polypeptide 2; Belongs to the cytochrome P450 family. (514 aa)    
Predicted Functional Partners:
cyp3a
Uncharacterized protein.
  
0.756
cyp3a40
Cytochrome P450 3A40.
  
0.736
LOC101174729
Aryl hydrocarbon receptor 2.
   
 0.726
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
 0.621
arnt
Aryl hydrocarbon receptor nuclear translocator.
    
 0.619
LOC101173499
Cytochrome P450, family 7, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family.
  
   
 0.558
ahrr
Uncharacterized protein.
     
 0.556
bard1
BRCA1 associated RING domain 1.
    
 0.540
LOC101170499
Cytochrome P450, family 4, subfamily F, polypeptide 3; Belongs to the cytochrome P450 family.
  
0.528
cyp19b
Aromatase B; Belongs to the cytochrome P450 family.
  
0.514
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.