LOC101158935 protein (Oryzias latipes) - STRING interaction network

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Score

LOC101158935

Scaffold attachment factor B. (807 aa)

Predicted Functional Partners:

prpf38a

0.575

sumo2

0.561

sumo2-2

0.561

sumo4

0.561

LOC101170959

0.521

acin1

0.521

sumo1

0.510

ncbp2

0.507

ngdn

0.485

HNRNPUL1

0.459

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HNRNPUL1	LOC101158935	ENSORLP00000001227	ENSORLP00000021256	Heterogeneous nuclear ribonucleoprotein U like 1.	Scaffold attachment factor B.	0.459
HNRNPUL1	ncbp2	ENSORLP00000001227	ENSORLP00000014087	Heterogeneous nuclear ribonucleoprotein U like 1.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.662
LOC101158935	HNRNPUL1	ENSORLP00000021256	ENSORLP00000001227	Scaffold attachment factor B.	Heterogeneous nuclear ribonucleoprotein U like 1.	0.459
LOC101158935	LOC101170959	ENSORLP00000021256	ENSORLP00000009234	Scaffold attachment factor B.	Apoptotic chromatin condensation inducer 1b.	0.521
LOC101158935	acin1	ENSORLP00000021256	ENSORLP00000042705	Scaffold attachment factor B.	SAP domain-containing protein.	0.521
LOC101158935	ncbp2	ENSORLP00000021256	ENSORLP00000014087	Scaffold attachment factor B.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.507
LOC101158935	ngdn	ENSORLP00000021256	ENSORLP00000007698	Scaffold attachment factor B.	Neuroguidin, EIF4E binding protein.	0.485
LOC101158935	prpf38a	ENSORLP00000021256	ENSORLP00000026976	Scaffold attachment factor B.	Pre-mRNA processing factor 38A.	0.575
LOC101158935	sumo1	ENSORLP00000021256	ENSORLP00000000767	Scaffold attachment factor B.	Small ubiquitin-related modifier.	0.510
LOC101158935	sumo2	ENSORLP00000021256	ENSORLP00000004077	Scaffold attachment factor B.	Small ubiquitin-related modifier.	0.561
LOC101158935	sumo2-2	ENSORLP00000021256	ENSORLP00000012260	Scaffold attachment factor B.	Small ubiquitin-related modifier.	0.561
LOC101158935	sumo4	ENSORLP00000021256	ENSORLP00000036220	Scaffold attachment factor B.	Small ubiquitin-related modifier.	0.561
LOC101170959	LOC101158935	ENSORLP00000009234	ENSORLP00000021256	Apoptotic chromatin condensation inducer 1b.	Scaffold attachment factor B.	0.521
LOC101170959	acin1	ENSORLP00000009234	ENSORLP00000042705	Apoptotic chromatin condensation inducer 1b.	SAP domain-containing protein.	0.900
acin1	LOC101158935	ENSORLP00000042705	ENSORLP00000021256	SAP domain-containing protein.	Scaffold attachment factor B.	0.521
acin1	LOC101170959	ENSORLP00000042705	ENSORLP00000009234	SAP domain-containing protein.	Apoptotic chromatin condensation inducer 1b.	0.900
ncbp2	HNRNPUL1	ENSORLP00000014087	ENSORLP00000001227	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Heterogeneous nuclear ribonucleoprotein U like 1.	0.662
ncbp2	LOC101158935	ENSORLP00000014087	ENSORLP00000021256	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Scaffold attachment factor B.	0.507
ncbp2	prpf38a	ENSORLP00000014087	ENSORLP00000026976	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Pre-mRNA processing factor 38A.	0.628
ngdn	LOC101158935	ENSORLP00000007698	ENSORLP00000021256	Neuroguidin, EIF4E binding protein.	Scaffold attachment factor B.	0.485