STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101162764Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. (1021 aa)    
Predicted Functional Partners:
LOC101158670
Uncharacterized protein.
    
 0.978
LOC101163979
Anti-silencing function 1Ba histone chaperone.
    
 0.969
ASF1B
Uncharacterized protein.
    
 0.969
CABIN1
Calcineurin binding protein 1.
    
 0.921
ENSORLP00000037341
MEF2_binding domain-containing protein.
    
 0.921
insig1
Insulin-induced gene protein; Mediates feedback control of cholesterol synthesis. Belongs to the INSIG family.
    
 
 0.713
rbbp4
Retinoblastoma binding protein 4.
    
 
0.689
LOC101156710
Retinoblastoma binding protein 4, like.
    
 
 0.689
wdr73
Uncharacterized protein.
    
 
 0.675
chaf1b
Chromatin assembly factor 1, subunit B.
    
 
0.574
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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