STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cep120Centrosomal protein 120. (974 aa)    
Predicted Functional Partners:
spice1
Spindle and centriole associated protein 1.
    
 
 0.694
plk4
Polo-like kinase 4 (Drosophila).
    
 0.623
ppm1g
Protein phosphatase, Mg2+/Mn2+ dependent, 1G.
    
 
 0.622
cep72
Centrosomal protein 72.
      
 0.622
cep164
WW domain-containing protein.
   
 0.601
kiaa0586
Uncharacterized protein.
    
 0.597
neurl4
Neuralized E3 ubiquitin protein ligase 4.
    
 0.592
LOC111946865
Pericentrin.
   
 0.586
poc5
POC5 centriolar protein homolog (Chlamydomonas).
   
  
 0.570
fbf1
Uncharacterized protein.
    
 
 0.567
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.