STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
naa20N(alpha)-acetyltransferase 20, NatB catalytic subunit. (178 aa)    
Predicted Functional Partners:
naa25
N(alpha)-acetyltransferase 25, NatB auxiliary subunit.
    
 0.997
NAA15
N(alpha)-acetyltransferase 15, NatA auxiliary subunit.
   
 0.849
naa50
N(alpha)-acetyltransferase 50, NatE catalytic subunit.
   
 
 0.846
naa30
N(alpha)-acetyltransferase 30, NatC catalytic subunit.
     
 0.843
naa35
N(alpha)-acetyltransferase 35, NatC auxiliary subunit.
     
 0.840
naa10
N(alpha)-acetyltransferase 10, NatA catalytic subunit.
   
 
0.721
naa40
N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae).
      
 0.674
hypk
Huntingtin interacting protein K.
   
  
 0.581
metap1
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
   
  
 0.570
naa60
N-acetyltransferase 15 (GCN5-related, putative).
   
  
 0.563
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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