STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101157335Uncharacterized protein. (1009 aa)    
Predicted Functional Partners:
ksr2
Kinase suppressor of ras 2.
    
 0.613
ksr1
Kinase suppressor of ras 1a.
    
 0.613
raf1
Raf-1 proto-oncogene, serine/threonine kinase a.
    
 0.557
araf
A-Raf proto-oncogene, serine/threonine kinase.
    
 0.557
braf
B-Raf proto-oncogene, serine/threonine kinase.
    
 0.557
SAMD12
Sterile alpha motif domain containing 12.
    
 0.502
LOC101156149
Uncharacterized protein.
    
 0.472
LOC101157118
V-ral simian leukemia viral oncogene homolog Ba (ras related).
    
 0.472
LOC101167252
V-ral simian leukemia viral oncogene homolog Aa (ras related).
    
 0.472
hras
HRas proto-oncogene, GTPase a.
    
 0.461
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.