STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHRNA1Cholinergic receptor nicotinic alpha 1 subunit. (456 aa)    
Predicted Functional Partners:
LOC101158195
Cholinergic receptor, nicotinic, alpha 4b.
  
0.688
LOC101155076
Cholinergic receptor, nicotinic, alpha 2b (neuronal).
  
0.688
chrna9
Cholinergic receptor, nicotinic, alpha 9.
  
0.625
LOC101162690
Cholinergic receptor, nicotinic, beta 3b (neuronal).
  
0.624
CHRNA9
Cholinergic receptor nicotinic alpha 9 subunit.
  
0.624
LOC101168098
Cholinergic receptor, nicotinic, beta polypeptide 3a.
  
0.624
LOC101158786
Cholinergic receptor, nicotinic, alpha 10a.
  
0.623
LOC101173433
Cholinergic receptor, nicotinic, alpha 5.
  
0.623
LOC101157879
Uncharacterized protein.
  
0.622
LOC101166241
Cholinergic receptor, nicotinic, epsilon.
  
0.605
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.