Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
H2MT51_ORYLA | aasdh | ENSORLP00000021944 | ENSORLP00000002421 | Uncharacterized protein. | Aminoadipate-semialdehyde dehydrogenase. | 0.625 |
H2MT51_ORYLA | bard1 | ENSORLP00000021944 | ENSORLP00000020088 | Uncharacterized protein. | BRCA1 associated RING domain 1. | 0.540 |
H2MT51_ORYLA | mre11 | ENSORLP00000021944 | ENSORLP00000009106 | Uncharacterized protein. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.488 |
H2MT51_ORYLA | ndufab1 | ENSORLP00000021944 | ENSORLP00000038384 | Uncharacterized protein. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.489 |
H2MT51_ORYLA | palb2 | ENSORLP00000021944 | ENSORLP00000043989 | Uncharacterized protein. | PALB2_WD40 domain-containing protein. | 0.489 |
H2MT51_ORYLA | rpap3 | ENSORLP00000021944 | ENSORLP00000011383 | Uncharacterized protein. | RNA polymerase II associated protein 3. | 0.478 |
H2MT51_ORYLA | ruvbl1 | ENSORLP00000021944 | ENSORLP00000001733 | Uncharacterized protein. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.821 |
H2MT51_ORYLA | ruvbl2 | ENSORLP00000021944 | ENSORLP00000015119 | Uncharacterized protein. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.875 |
H2MT51_ORYLA | telo2 | ENSORLP00000021944 | ENSORLP00000009368 | Uncharacterized protein. | TEL2, telomere maintenance 2, homolog (S. cerevisiae). | 0.971 |
H2MT51_ORYLA | tti1 | ENSORLP00000021944 | ENSORLP00000039617 | Uncharacterized protein. | TELO2 interacting protein 1. | 0.977 |
aasdh | H2MT51_ORYLA | ENSORLP00000002421 | ENSORLP00000021944 | Aminoadipate-semialdehyde dehydrogenase. | Uncharacterized protein. | 0.625 |
aasdh | ndufab1 | ENSORLP00000002421 | ENSORLP00000038384 | Aminoadipate-semialdehyde dehydrogenase. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.995 |
aasdh | palb2 | ENSORLP00000002421 | ENSORLP00000043989 | Aminoadipate-semialdehyde dehydrogenase. | PALB2_WD40 domain-containing protein. | 0.995 |
bard1 | H2MT51_ORYLA | ENSORLP00000020088 | ENSORLP00000021944 | BRCA1 associated RING domain 1. | Uncharacterized protein. | 0.540 |
bard1 | mre11 | ENSORLP00000020088 | ENSORLP00000009106 | BRCA1 associated RING domain 1. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.976 |
bard1 | ndufab1 | ENSORLP00000020088 | ENSORLP00000038384 | BRCA1 associated RING domain 1. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.948 |
bard1 | palb2 | ENSORLP00000020088 | ENSORLP00000043989 | BRCA1 associated RING domain 1. | PALB2_WD40 domain-containing protein. | 0.971 |
bard1 | tti1 | ENSORLP00000020088 | ENSORLP00000039617 | BRCA1 associated RING domain 1. | TELO2 interacting protein 1. | 0.673 |
mre11 | H2MT51_ORYLA | ENSORLP00000009106 | ENSORLP00000021944 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | Uncharacterized protein. | 0.488 |
mre11 | bard1 | ENSORLP00000009106 | ENSORLP00000020088 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | BRCA1 associated RING domain 1. | 0.976 |
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