STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101173870Kazal-type serine peptidase inhibitor domain 3. (308 aa)    
Predicted Functional Partners:
LOC101162917
Fras1 related extracellular matrix 1b.
      
 0.679
frem1
Fras1 related extracellular matrix 1a.
      
 0.679
igf2
Insulin-like growth factor 2b.
    
 
 0.583
hus1
Checkpoint protein; Belongs to the HUS1 family.
      
 0.558
LOC101166486
NADPH--cytochrome P450 reductase; This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5; In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
      
 0.416
mtrr
5-methyltetrahydrofolate-homocysteine methyltransferase reductase.
      
 0.416
nos1
Uncharacterized protein.
      
 0.416
samd7
Sterile alpha motif domain containing 7.
   
 
  0.405
fam20a
FAM20A golgi associated secretory pathway pseudokinase.
   
 
  0.405
fam20b
FAM20B glycosaminoglycan xylosylkinase.
   
 
  0.405
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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