STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101174390Microtubule-associated protein, RP/EB family, member 3b. (273 aa)    
Predicted Functional Partners:
ckap5
Cytoskeleton associated protein 5.
   
 
 0.831
mad2l1
HORMA domain-containing protein.
   
 0.809
bub3
BUB3 mitotic checkpoint protein.
   
 0.743
aurkb
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.682
aurka
Aurora kinase A; Belongs to the protein kinase superfamily.
   
 0.682
mapre1
Microtubule-associated protein, RP/EB family, member 1b.
  
 
  
0.682
LOC101160375
Uncharacterized protein.
   
 0.653
bub1b
BUB1 N-terminal domain-containing protein.
   
 0.653
H2MU36_ORYLA
Uncharacterized protein.
   
 
 0.632
ENSORLP00000028214
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.632
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.